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build:optpkgs [2016/04/12 13:19] – created Yann Pouillonbuild:optpkgs [2020/08/10 12:22] (current) – [YAML] Xavier Gonze
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-===== Optional packages ======+====== Optional packages ======
  
-===== Optional packages =====+===== Overview ===== 
 +The following list includes plugin libraries which abinit can use to add features (DMFT, Wannier functions...) and interoperability (other pseudopotential formats...). They are listed in alphabetical order, not by order of importance. Several are available as fallbacks for abinit: see the options of the configure script for more details, and some links below on installation procedures.
  
-==== Overview ====+===== AtomPAW =====
  
-==== AtomPAW ==== +AtomPAW is a generation library for PAW atomic data sets (like pseudopotentials) created by Prof Nathalie Holzwarth and developed in close collaboration with the ABINIT team. It is the reference package to generate datasets for ABINIT, but several others can be used as well.
- +
-xxx+
  
 You can download AtomPAW from its [[http://users.wfu.edu/natalie/papers/pwpaw/man.html|Wake Forest University project page]]. You can download AtomPAW from its [[http://users.wfu.edu/natalie/papers/pwpaw/man.html|Wake Forest University project page]].
  
-Our [[build:install_atompaw|Installing AtomPAW]] page will give you useful instructions to install AtomPAW properly and make it work with Abinit. +//Please note that AtomPAW depends on [[build:minreq#linear_algebra|linear algebra]] and [[build:minreq#libxc|LibXC]], which must be installed before.//
- +
-//Please note that AtomPAW depends on [[build:extdeps#linear_algebra|linear algebra]] and [[build:extdeps#libxc|LibXC]], which must be installed before.//+
  
 <WRAP tip>**Useful tip** \\ AtomPAW is not necessary to build Abinit but will let you execute more test cases from the test suite and create your own PAW datasets.</WRAP> <WRAP tip>**Useful tip** \\ AtomPAW is not necessary to build Abinit but will let you execute more test cases from the test suite and create your own PAW datasets.</WRAP>
  
-==== BigDFT ====+===== BigDFT =====
  
-xxx+BigDFT is a DFT code, solving the Kohn Sham equations in a Wavelet basis set. It is adapted for large systems with multiresolution and many nice features (PAW, fancy Poisson solvers, QM/MM...). BigDFT is interfaced with and can be called from ABINIT, to exploit some features of the latter.
  
 You can download BigDFT from its [[http://www.bigdft.org/|Home page]]. You can download BigDFT from its [[http://www.bigdft.org/|Home page]].
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 Our [[build:install_bigdft|Installing BigDFT]] page will give you useful instructions to install BigDFT properly and make it work with Abinit. Our [[build:install_bigdft|Installing BigDFT]] page will give you useful instructions to install BigDFT properly and make it work with Abinit.
  
-//Please note that BigDFT requires [[build:extdeps#linear_algebra|linear algebra]] and also depends on [[build:extdeps#etsf_io|ETSF_IO]] and [[build:extdeps#libxc|LibXC]], which must be installed before.//+//Please note that BigDFT requires [[build:minreq#linear_algebra|linear algebra]] and also depends on [[build:minreq#libxc|LibXC]], which must be installed before.//
  
-==== ETSF_IO ==== 
  
-ETSF_IO is a Fortran library allowing the platform-independent storage and exchange of electronic-structure data. It is of great interest to restart a calculation on a different computer, as well as to perform multi-step calculations involving other software projects. Thanks to ETSF_IO, Abinit can for instance calculate the ground-state properties of a system and provide input data for a GW calculation with [[http://yambo-code.org/|Yambo]]. 
  
-You can download ETSF_IO from: +===== Levmar =====
-  * the [[http://www.etsf.eu/resources/software/libraries_and_tools|Libraries and Tools]] page of the [[http://www.etsf.eu/|ETSF website]]; +
-  * its [[https://launchpad.net/etsf-io|Launchpad project page]].+
  
-Our [[build:install_etsf_io|Installing ETSF_IO]] page will give you useful instructions to install ETSF_IO properly and make it work with Abinit. +Levmar is a library implementing the Levenberg-Marquardt optimization algorithm, which ABINIT can call and use.
- +
-//Please note that ETSF_IO depends on [[build:extdeps#netcdf|NetCDF]], which must be installed before.// +
- +
-==== FoX ==== +
- +
-xxx +
- +
-You can download FoX from its [[http://www1.gly.bris.ac.uk/~walker/FoX/|University of Bristol page]]. +
- +
-Our [[build:install_fox|Installing FoX]] page will give you useful instructions to install FoX properly and make it work with Abinit. +
- +
-==== GSL ==== +
- +
-xxx +
- +
-You can download the GSL from the [[http://www.gnu.org/software/gsl/|GNU website]] or your [[http://ftpmirror.gnu.org/gsl/|nearest mirror]]. +
- +
-Our [[build:install_gsl|Installing GSL]] page will give you useful instructions to install the GSL properly and make it work with Abinit. +
- +
-==== Levmar ==== +
- +
-xxx+
  
 You can download Levmar from its [[http://users.ics.forth.gr/~lourakis/levmar/|FORTH-ICS page]]. You can download Levmar from its [[http://users.ics.forth.gr/~lourakis/levmar/|FORTH-ICS page]].
  
-Our [[build:install_levmar|Installing Levmar]] page will give you useful instructions to install Levmar properly and make it work with Abinit.+===== Libpspio =====
  
-==== Libpspio ==== +Libpspio is a library for interchange (input and output) of different pseudopotential file formats. It supports a number of them for many different codes.
- +
-xxx+
  
 You can download Libpspio from its [[https://launchpad.net/libpspio|Launchpad project page]] and soon from its [[http://esl.cecam.org/mediawiki/index.php/Libpspio|ESL wiki page]]. You can download Libpspio from its [[https://launchpad.net/libpspio|Launchpad project page]] and soon from its [[http://esl.cecam.org/mediawiki/index.php/Libpspio|ESL wiki page]].
  
-Our [[build:install_libpspio|Installing Libpspio]] page will give you useful instructions to install Libpspio properly and make it work with Abinit.+===== PAPI =====
  
-==== LibXC ==== +PAPI is a library for instruction counting and profiling, to know where your code is spending time.
- +
-xxx +
- +
-You can download LibXC from its [[http://www.tddft.org/programs/octopus/wiki/index.php/Libxc|Octopus wiki page]]. +
- +
-Our [[build:install_libxc|Installing LibXC]] page will give you useful instructions to install LibXC properly and make it work with Abinit. +
- +
-==== NetCDF ==== +
- +
-xxx +
- +
-You can download NetCDF from its [[http://www.unidata.ucar.edu/software/netcdf/|Unidata page]]. +
- +
-Our [[build:install_netcdf|Installing NetCDF]] page will give you useful instructions to install NetCDF properly and make it work with Abinit. +
- +
-==== PAPI ==== +
- +
-xxx+
  
 You can download PAPI from its [[http://icl.cs.utk.edu/papi/|University of Tennessee page]]. You can download PAPI from its [[http://icl.cs.utk.edu/papi/|University of Tennessee page]].
  
-Our [[build:install_papi|Installing PAPI]] page will give you useful instructions to install PAPI properly and make it work with Abinit.+===== PSML =====
  
-==== PSML ==== +PSML is a library pseudopotential file format in XML, with a corresponding library. PSML is supported by a number of codes, in particular ABINIT and SIESTA, to have inter-operable DFT calculations with different features.
- +
-xxx+
  
 You can download PSML from its [[https://launchpad.net/libpsml|Launchpad project page]]. You can download PSML from its [[https://launchpad.net/libpsml|Launchpad project page]].
  
-Our [[build:install_psml|Installing PSML]] page will give you useful instructions to install PSML properly and make it work with Abinit.+[TO BE SUPPRESSED, see Fallbacks]. Our [[build:install_psml|Installing PSML]] page will give you useful instructions to install PSML properly and make it work with Abinit.
  
-==== TRIQS ====+===== TRIQS =====
  
-xxx+TRIQS is a library for the quantum Monte Carlo solution of a quantum correlated impurity problem (within DMFT).
  
 You can download TRIQS from its [[https://triqs.ipht.cnrs.fr/|CNRS page]]. You can download TRIQS from its [[https://triqs.ipht.cnrs.fr/|CNRS page]].
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 Our [[build:install_triqs|Installing TRIQS]] page will give you useful instructions to install TRIQS properly and make it work with Abinit. Our [[build:install_triqs|Installing TRIQS]] page will give you useful instructions to install TRIQS properly and make it work with Abinit.
  
-==== Wannier90 ====+===== Wannier90 ====
 + 
 +Wannier90 implements the maximally localized Wannier Function scheme from Marzari and Vanderbilt. It allows interpolation and post-processing of many electronic quantities, and is interfaced with most modern DFT codes.
  
-xxx+You can download Wannier90 from: 
 +  * its [[http://wannier.org/|home page]] for the pristine version; 
 +  * the [[https://launchpad.net/wannier90|Launchpad project page]] for the patched version that works directly with Abinit.
  
-You can download Wannier90 from its [[http://wannier.org/|home page]].+[TO BE SUPPRESSED, see Fallbacks]. Our [[build:install_wannier90|Installing Wannier90]] page will give you useful instructions to install Wannier90 properly and make it work with Abinit.
  
-Our [[build:install_wannier90|Installing Wannier90]] page will give you useful instructions to install Wannier90 properly and make it work with Abinit.+//Please note that Wannier90 requires [[build:minreq#linear_algebra|linear algebra]], which must be installed before.//
  
-//Please note that Wannier90 requires [[build:extdeps#linear_algebra|linear algebra]], which must be installed before.//+<WRAP important>**Warning!** \\ The pristine version of Wannier90 has some bugs and must be patched to work with Abinit. If you decide to use it, please download our patches from the [[build:install_wannier90|Installing Wannier90]] page.</WRAP>
  
-==== YAML ====+===== YAML =====
  
-xxx+YAML is a human readable yet easy to parse file format, for some input and output files of ABINIT.
  
-You can download YAML from the [[http://pyyaml.org/download/libyaml/|PyYAML repository]].+Very often, it is available with your OS. However, if not, you can download YAML from the [[http://pyyaml.org/download/libyaml/|PyYAML repository]].
  
-Our [[build:install_yaml|Installing YAML]] page will give you useful instructions to install YAML properly and make it work with Abinit. 
build/optpkgs.1460459974.txt.gz · Last modified: 2016/04/12 13:19 by Yann Pouillon